Yilmaz Ciftci, Oguzhan Eroglu, Sirin Firidin,
Determination of Sturgeon Species Living in the Black Sea Coasts of Turkey
by
Sequence, RFLP and Multiplex PCR Analysis Methods,
Journal of Animal and Veterinary Advances,
Volume 12,Issue 6,
2013,
Pages 676-682,
ISSN 1680-5593,
javaa.2013.676.682,
(https://makhillpublications.co/view-article.php?doi=javaa.2013.676.682)
Abstract: In order to perform checks in the trade of fish species under
the threat of extinction and with commercial importance such as sturgeon, the
fish must be identified rapidly and precisely from any tissue and for this purpose
morphometric and protein based determinations can be inadequate. In this study,
Acipenser stellatus, Acipenser gueldenstaedtii and Huso huso
sampled from Trabzon coasts were used. For RFLP and sequence analysis, the mitochondrial
Cytochrome-b (mtDNA Cyt-b) gene was amplified by the help of PCR. From
Cyt-b sequence data, it was observed that in the Maximum Parsimony (MP) dendrogram,
99% of the species were separated. Furthermore in the Cyt-b PCR product restriction
enzyme analyses, it was determined that Hinf I and Rsa I enzymes were distinguishing
for 3 species. In the multiplex PCR application in the mtDNA D-loop region,
the product lengths were determined as 420 bp for A. gueldenstaedtii,
350 bp for H. huso and 260 bp for A. stellatus and they are distinctive
for the species. The results showed that the multiplex PCR application is a
method which is cheap and effective for the identification of sturgeon species
in short duration.
Keywords: Sturgeon;mitochondrial DNA;multiplex PCR;PCR-RFLP;sequence;species identification